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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015854333.1_cds_XP_016512507.1_25146
CDS Infomation

[gene=LOC107829573] [db_xref=GeneID:107829573] [protein=AUGMIN subunit 4-like] [protein_id=XP_016512507.1] [location=complement(join(60983..61060,61157..61234,62146..62197,62276..62344,63362..63420,63600..63671,63810..63903,64671..64681,65128..65346,65581..65931,66883..67008,67243..67290,67393..67521))] [gbkey=CDS]
Sequence

ATGGTAAGAGGGGTGGGTTCGCAAAACCTGGCGGCGGATGTGACACAGCTGATCGATCAG
TTAGAGCGCCACTGCTTAGCCCCTGATGGATCTCTCATCTCCAAATCAGCTTACTTCGAT
CTCCAACTCGCTAGAGAAGAAATGTCAAAGGAGAGGCAGCGCTATTTGGAATCCTTAGCA
ATATATATTGAGGCGACCGCCATGGTAGAAGATTACCAGCAAGCCATTTCTGTGGCCAAT
CTCGGTGGTATTCGAGATGTGCAGGGTTTATACTCTCAATTGGGCCTGAAAAACCCTCCT
CAGGTTTATGAGGCTCTTGAGCATAGGATGGTTGTTGCGGAAGCAGCTCAGAGATTGAGG
CTTCCACTCATCTCCAAAGACGGTGAGATTCACGAGGAGGAAATTGAAAAATGGAGTATA
CTGTCGAGATGTTCTATTGATAGCACAAGCACCAGCATCACATTAAGCTCGAGCTCAAAC
TCAACTTATCAAACCAATGCATCTGTAATTGGAGCTGTTCCTGCAGCAAGCAGTGCTTCC
ACTACTAGTACAACTGATGCAACAGAATCAGATGTTGGTGGTGTTCCCAATCGATTCCTT
GGAGTTACGCCTGCATATTTATGGCAAACTCAACTACATCAGATGTCATCAGTGGATGTG
GCAGAATACCAGAGATTGCTTTCACGTGAGATTGGAAGCCGGTTGGATGCTAAATGTGAT
AAGTTATCTAATACAGTTGCTATTGATGACATTGGTACGTTTAAATTGCTTATTTCTCTT
CCTTCGTCTTCTCTTGGTCCTTCGCCTTTCTTTGTGTTTGTTGGTTGGTGGATTTTTGTC
TGTTTTTCTTTTAAACAACCCAGCATTGATACGTGTATTCTTCGGGTAAAGTTGATCATT
GAGGAGATTGAAAGAGAGGAAACGGCATGGCGTGAGGATTTATATTCATCTAACAGAAAA
TTTGCAGAATACTATAATGTTTTGGAGCAGATCCTTGGTGTGCTCATTAAGCTTGTCAAA
GATATAAAGTTGGACCATCAACATAAATATGATGAACTGCAAAAGACGTGGCTGTGCAAA
AGATGTGAGACAATGAGGGCAAAATTAAGAGTTCTGGAACATATTCTCCTACTCGAGACG
TATACCCCGGAAACTATCCCTGCACTTCACAAAATAAGGAAGTATTTGATTGAAGCAACA
GAGGAAGCATCGCTTGCATATGAGAAAGCGGCTGCCCGCCTTCGTGAGTATCAGGGGGTT
GACCCTCATTTTGACGAAATTGCTAGGCAGTACCATGACATTGTAAAGAAATTAGAGAGT
ATGCAGTGGACCATCAACCAAGTTGAAATGGACTTGAATCCTTTGCCCGCTCACCCCCGT
GCCTAA

Peptide Sequence

PEP ID

XP_016512507.1
PEP Infomation

PREDICTED: AUGMIN subunit 4-like [Nicotiana tabacum]
Sequence

MVRGVGSQNLAADVTQLIDQLERHCLAPDGSLISKSAYFDLQLAREEMSKERQRYLESLA
IYIEATAMVEDYQQAISVANLGGIRDVQGLYSQLGLKNPPQVYEALEHRMVVAEAAQRLR
LPLISKDGEIHEEEIEKWSILSRCSIDSTSTSITLSSSSNSTYQTNASVIGAVPAASSAS
TTSTTDATESDVGGVPNRFLGVTPAYLWQTQLHQMSSVDVAEYQRLLSREIGSRLDAKCD
KLSNTVAIDDIGTFKLLISLPSSSLGPSPFFVFVGWWIFVCFSFKQPSIDTCILRVKLII
EEIEREETAWREDLYSSNRKFAEYYNVLEQILGVLIKLVKDIKLDHQHKYDELQKTWLCK
RCETMRAKLRVLEHILLLETYTPETIPALHKIRKYLIEATEEASLAYEKAAARLREYQGV
DPHFDEIARQYHDIVKKLESMQWTINQVEMDLNPLPAHPRA

Transcript Sequence

Gene sequence data has not been registered.